A Level · Topic 13.1
A-Level Biology 9700 / Topic 13 / A2

Fix, reduce, regenerate.

In the stroma, carbon dioxide is captured by a five-carbon acceptor and built up into sugars. The cycle runs on the ATP and reduced NADP from the thylakoids, and it has to rebuild its own acceptor to keep turning.

The key idea

The Calvin cycle (light-independent stage) takes place in the stroma and uses the ATP and reduced NADP from the light-dependent stage to make complex organic molecules. It has three main stages. Fixation: the enzyme rubisco combines carbon dioxide with ribulose bisphosphate (RuBP, 5C), giving two molecules of glycerate 3-phosphate (GP, 3C). Reduction: GP is reduced to triose phosphate (TP, 3C) in reactions using reduced NADP and ATP. Regeneration: most of the TP is used to regenerate RuBP, in reactions that use ATP. The remaining TP is used to make carbohydrates, lipids and amino acids, and some GP is used to make amino acids.

RuBP (5C) 2 × GP (3C) 2 × TP (3C) CO₂ (1C) 1 fixation (rubisco) 2 reduction ATP + reduced NADP in 3 regeneration ATP in some TP leaves: sugars, lipids, amino acids stroma
Fig. 1: the three stages of the Calvin cycle in the stroma, shown for one carbon dioxide molecule fixed
Section 01

Three turns, one triose phosphate.

Click each stage chip in turn: carbon fixation, reduction, regeneration and products. The lab follows three turns of the cycle: 3 RuBP and 3 CO2 give 6 GP, then 6 ATP and 6 reduced NADP (labelled NADPH) make 6 TP, then 3 ATP rebuild 3 RuBP from 5 of the TP, and 1 TP leaves.

StageWhat happensFor 3 CO2 (three turns)
1 fixationrubisco catalyses the combination of CO2 with RuBP (5C); the unstable 6C product splits at once into two GP (3C)3 RuBP + 3 CO2 → 6 GP
2 reductionGP is reduced to TP; reduced NADP supplies the hydrogen (reducing power) and ATP supplies energy6 GP + 6 ATP + 6 reduced NADP → 6 TP
3 regenerationTP molecules are rearranged into RuBP, using ATP5 TP (15 C) + 3 ATP → 3 RuBP (15 C)
net gainone TP is free to leave the cycle1 TP (3 C), the 3 C fixed
Examiner trap

Rubisco fixes carbon dioxide; it does not use ATP. ATP and reduced NADP are used in the reduction of GP to TP, and ATP again in regenerating RuBP. Also: RuBP is 5C, GP and TP are both 3C.

Stage 1 · Learn

Check what the sim just showed you

Four quick checks. Each correct answer earns XP and records this skill on your profile.

Quick check+10 XP

In the carbon fixation stage of the simulator, what does rubisco join together?

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Which stage in the simulator uses the 6 ATP and 6 reduced NADP tokens?

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In the lab's three turns, why are 5 of the 6 TP molecules kept in the cycle?

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How many carbon atoms are in RuBP, GP and TP?

Section 02

What the cycle makes.

Click products in the simulator. One TP in six leaves the cycle; the rest must stay to rebuild RuBP, or the cycle would stop.

IntermediateUsed to make
triose phosphate (TP)carbohydrates: two TP make a hexose such as glucose, then sucrose, starch and cellulose
lipids: TP gives glycerol and is used to make fatty acids
amino acids
glycerate 3-phosphate (GP)some amino acids
Examiner trap

In data questions about switching the light off, the first change is in the reduction step: GP rises because it is still being made from RuBP but can no longer be reduced, and RuBP falls because it is not regenerated.

Stage 2 · Exam

Exam-style questions

Unlocks once the four checks above are done. Worth more XP, written to A Level Paper 4 standard.

Finish the four checks above to unlock the exam questions
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An alga is photosynthesising in bright light. The light is switched off. What happens to the concentrations of GP and RuBP in the next minute?

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The carbon dioxide supply to a plant in constant light is cut off. What happens to GP and RuBP?

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How many molecules of ATP and reduced NADP are used to fix 6 molecules of carbon dioxide?

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Which molecules can be made from triose phosphate leaving the Calvin cycle?

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The Calvin cycle, mastered.

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Six original Cambridge-style questions
Fixation of carbon dioxide by rubisco, reduction of GP to TP using ATP and reduced NADP, regeneration of RuBP, and the uses of GP and TP.